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1.
Sci Rep ; 12(1): 9, 2022 01 07.
Artículo en Inglés | MEDLINE | ID: mdl-34997050

RESUMEN

Non-pathogenic Neisseria are a reservoir of antimicrobial resistance genes for pathogenic Neisseria meningitidis and Neisseria gonorrhoeae. Men who have sex with men (MSM) are at risk of co-colonization with resistant non-pathogenic and pathogenic Neisseria. We assessed if the antimicrobial susceptibility of non-pathogenic Neisseria among MSM differs from a general population and if antimicrobial exposure impacts susceptibility. We recruited 96 participants at our center in Belgium: 32 employees, 32 MSM who did not use antibiotics in the previous 6 months, and 32 MSM who did. Oropharyngeal Neisseria were cultured and identified with MALDI-TOF-MS. Minimum inhibitory concentrations for azithromycin, ceftriaxone and ciprofloxacin were determined using E-tests® and compared between groups with non-parametric tests. Non-pathogenic Neisseria from employees as well as MSM were remarkably resistant. Those from MSM were significantly less susceptible than employees to azithromycin and ciprofloxacin (p < 0.0001, p < 0.001), but not ceftriaxone (p = 0.3). Susceptibility did not differ significantly according to recent antimicrobial exposure in MSM. Surveilling antimicrobial susceptibility of non-pathogenic Neisseria may be a sensitive way to assess impact of antimicrobial exposure in a population. The high levels of antimicrobial resistance in this survey indicate that novel resistance determinants may be readily available for future transfer from non-pathogenic to pathogenic Neisseria.


Asunto(s)
Antibacterianos/farmacología , Neisseria/efectos de los fármacos , Orofaringe/microbiología , Bélgica , Ciprofloxacina/farmacología , Homosexualidad Masculina/estadística & datos numéricos , Humanos , Masculino , Pruebas de Sensibilidad Microbiana , Persona de Mediana Edad , Neisseria/clasificación , Neisseria/genética , Neisseria/aislamiento & purificación , Penicilinas/farmacología , Tetraciclina/farmacología
2.
J Biosci ; 462021.
Artículo en Inglés | MEDLINE | ID: mdl-34148877

RESUMEN

Diagnosis and treatment of various diseases in Ayurveda, the Indian system of medicine, relies on 'prakriti' phenotyping of individuals into predominantly three constitutions, kapha, pitta and vata. Recent studies propose that microbiome play an integral role in precision medicine. A study of the relationship between prakriti - the basis of personalized medicine in Ayurveda and that of gut microbiome, and possible biomarker of an individual's health, would vastly improve precision therapy. Towards this, we analyzed bacterial metagenomes from buccal (oral microbiome) and fecal (gut microbiome) samples of 272 healthy individuals of various predominant prakritis. Major bacterial genera from gut microbiome included Prevotella, Bacteroides and Dialister while oral microbiome included Streptococcus, Neisseria, Veilonella, Haemophilus, Porphyromonas and Prevotella. Though the core microbiome was shared across all individuals, we found prakriti specific signatures such as preferential presence of Paraprevotella and Christensenellaceae in vata individuals. A comparison of core gut microbiome of each prakriti with a database of 'healthy' microbes identified microbes unique to each prakriti with functional roles similar to the physiological characteristics of various prakritis as described in Ayurveda. Our findings provide evidence to Ayurvedic interventions based on prakriti phenotyping and possible microbial biomarkers that can stratify the heterogenous population and aid in precision therapy.


Asunto(s)
Medicina Ayurvédica/métodos , Metagenoma , Medicina de Precisión/métodos , Simbiosis/fisiología , Adulto , Técnicas de Tipificación Bacteriana , Bacteroides/clasificación , Bacteroides/genética , Bacteroides/aislamiento & purificación , ADN Bacteriano/genética , Heces/microbiología , Femenino , Microbioma Gastrointestinal/genética , Haemophilus/clasificación , Haemophilus/genética , Haemophilus/aislamiento & purificación , Voluntarios Sanos , Humanos , Masculino , Boca/microbiología , Neisseria/clasificación , Neisseria/genética , Neisseria/aislamiento & purificación , Filogenia , Porphyromonas/clasificación , Porphyromonas/genética , Porphyromonas/aislamiento & purificación , Prevotella/clasificación , Prevotella/genética , Prevotella/aislamiento & purificación , Streptococcus/clasificación , Streptococcus/genética , Streptococcus/aislamiento & purificación , Veillonella/clasificación , Veillonella/genética , Veillonella/aislamiento & purificación , Veillonellaceae/clasificación , Veillonellaceae/genética , Veillonellaceae/aislamiento & purificación
3.
Microb Genom ; 6(9)2020 09.
Artículo en Inglés | MEDLINE | ID: mdl-32845827

RESUMEN

Commensal non-pathogenic Neisseria spp. live within the human host alongside the pathogenic Neisseria meningitidis and Neisseria gonorrhoeae and due to natural competence, horizontal gene transfer within the genus is possible and has been observed. Four distinct Neisseria spp. isolates taken from the throats of two human volunteers have been assessed here using a combination of microbiological and bioinformatics techniques. Three of the isolates have been identified as Neisseria subflava biovar perflava and one as Neisseria cinerea. Specific gene clusters have been identified within these commensal isolate genome sequences that are believed to encode a Type VI Secretion System, a newly identified CRISPR system, a Type IV Secretion System unlike that in other Neisseria spp., a hemin transporter, and a haem acquisition and utilization system. This investigation is the first to investigate these systems in either the non-pathogenic or pathogenic Neisseria spp. In addition, the N. subflava biovar perflava possess previously unreported capsule loci and sequences have been identified in all four isolates that are similar to genes seen within the pathogens that are associated with virulence. These data from the four commensal isolates provide further evidence for a Neisseria spp. gene pool and highlight the presence of systems within the commensals with functions still to be explored.


Asunto(s)
Proteínas Bacterianas/genética , Neisseria/clasificación , Faringe/microbiología , Secuenciación Completa del Genoma/métodos , Transferencia de Gen Horizontal , Voluntarios Sanos , Secuenciación de Nucleótidos de Alto Rendimiento , Humanos , Familia de Multigenes , Neisseria/genética , Neisseria/aislamiento & purificación , Neisseria/patogenicidad , Filogenia , Simbiosis , Sistemas de Secreción Tipo VI/genética , Factores de Virulencia/genética
4.
Acta Microbiol Immunol Hung ; 67(4): 258-260, 2020 Mar 30.
Artículo en Inglés | MEDLINE | ID: mdl-32223307

RESUMEN

MALDI-TOF MS provides fast, easy to perform and cost-effective diagnosis in clinical microbiology laboratories, however in some cases results of MALDI-TOF MS should be confirmed with additional tests. This confirmation is especially important for causes of life-threatening infections like Neisseria meningitidis. In our laboratory, three isolates were identified as N. meningitidis by Bruker MALDI Biotyper (BD, USA) between April 2018 and March 2019 from clinical specimens of blood, sputum, and urine. 16S rRNA sequencing was performed for further investigation. Two of the isolates were identified as Neisseria subflava and only one was confirmed as N. meningitidis by sequencing. These results show that MALDI-TOF MS is not always reliable in the diagnosis of N. meningitidis and clinical microbiologists should confirm these results with additional tests. Also, clinical correlations should be determined. Accurate identification of this microorganism is very important because of the necessity of prophylactic antimicrobial usage and biosafety precautions. Enlarged databases of Neisseria species are needed to overcome this problem.


Asunto(s)
Técnicas de Tipificación Bacteriana/métodos , Neisseria meningitidis/clasificación , Neisseria/clasificación , Infecciones por Neisseriaceae/microbiología , Adulto , Errores Diagnósticos , Femenino , Genes de ARNr , Humanos , Masculino , Persona de Mediana Edad , Neisseria/genética , Neisseria/aislamiento & purificación , Neisseria meningitidis/genética , Neisseria meningitidis/aislamiento & purificación , Infecciones por Neisseriaceae/diagnóstico , ARN Ribosómico 16S/genética , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
5.
J Med Microbiol ; 68(12): 1793-1801, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31674897

RESUMEN

Introduction. Colonization by Neisseria meningitidis is the pre-requisite for the development of disease. We present the findings of a cross-sectional investigation onto the oropharyngeal carriage of N. meningitidis and Neisseria species in the population aged 3 to 21 in Paraguay.Aim. Carriage prevalence by age groups, risk factors associated with carriage, and phenotypic and genotypic characteristics of strains are described.Methodology. We collected 2011 oropharyngeal swabs from consenting participants aged 3-21 years. Infants were recruited at immunization clinics, and older children and young adults were identified at schools and universities. A single oropharyngeal swab was collected and processed for the identification and isolation of Neisseria. Additionally, participants, or their legal guardian if these were minors, were requested to fill a standardized questionnaire.Results. N. meningitidis was isolated in 42/2011 (2.1 %) participants, while other Neisseria spp. were identified in 306/2011 (15.2 %) subjects: N. cinerea and N. lactamica were identified in 39/2011 (1.9 %) and 43/2011 (2.2 %), respectively. Meningococcal strains belonged to ten different clonal complexes, of which six are associated with invasive disease (ST-32/ET5 complex, ST-11/ET37 complex, ST-103 complex, ST-167 complex, ST-35 complex and ST-41/44 complex/lineage 3).Conclusion. Prevalence of N. meningitidis carriage was low compared to that reported from other settings, however, the overall carriage of Neisseria spp. (including N. meningitidis) was comparable to meningococcal carriage prevalence reported in the literature. This study is the first of its kind conducted in Paraguay, and one of the few known in the Southern Cone of Latin America.


Asunto(s)
Portador Sano/epidemiología , Neisseria meningitidis/aislamiento & purificación , Neisseria/aislamiento & purificación , Orofaringe/microbiología , Adolescente , Niño , Preescolar , Estudios Transversales , Femenino , Humanos , Masculino , Neisseria/clasificación , Paraguay , Adulto Joven
6.
Int J Syst Evol Microbiol ; 69(8): 2305-2311, 2019 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-31162020

RESUMEN

Three independent isolates (10022T, 10 009 and 10011) of a novel catalase-positive, Gram-stain-negative coccus in the genus Neisseria were obtained from the rectal contents of plateau pika on the Qinghai-Tibet Plateau, PR China. Based on 16S rRNA gene sequence analysis, our newly identified organisms were most closely related to Neisseria iguanae, Neisseria flavescens and Neisseria perflava with similarities ranging from 98.02 to 98.45 %, followed by seven other species in the genus Neisseria. Phylogenetic analysis based on 16S rRNA and rplF genes showed that our three novel isolates group with members of the genus Neisseria. Results of the average nucleotide identity (ANI) analysis confirmed that our isolates are of the same species, and the ANI values between type strain 10022T and other Neisseria species are 74.12-85.06 %, lower than the threshold range of 95-96 %. The major cellular fatty acids for our novel species are C16 : 0 and C16:1ω7c/C16:1ω6c, which along with their phenotypic characteristics can distinguish our isolates from other Neisseria species. On the basis of polyphasic analyses, our isolates are proposed to represent a novel species in genus Neisseria, with the name Neisseria weixii sp. nov. The type strain is 10022T (=DSM 103441T=CGMCC 1.15732T).


Asunto(s)
Lagomorpha/microbiología , Neisseria/clasificación , Filogenia , Recto/microbiología , Animales , Técnicas de Tipificación Bacteriana , Composición de Base , China , ADN Bacteriano/genética , Ácidos Grasos/química , Neisseria/aislamiento & purificación , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Tibet
7.
J Mol Biol ; 431(16): 3010-3014, 2019 07 26.
Artículo en Inglés | MEDLINE | ID: mdl-30986425

RESUMEN

The 10 human-restricted Neisseria species all colonize mucosal surfaces, but show a spectrum of pathogenicity. The commensal Neisseria do not normally cause pathology, while the two pathogenic species, Neisseria meningitidis and Neisseria gonorrhoeae, straddle the border between commensalism and pathogenicity. Why the pathogenic Neisseria continue to mediate host damage after thousands of years of co-evolution with their human host, and why the commensal species have not acquired the ability to damage the host, if this capability provides a selective advantage, is not understood. One way the pathogenic species are different from the commensal species is by their ability to induce PMN inflammation, which is dependent on the site of colonization. I discuss how the site of colonization dictates whether copious inflammation occurs with both pathogenic species. I put forth a model that posits that an ancestor of both pathogenic species changed colonization site from the oral cavity to the genital tract of a human or humanoid and had to evolve multiple, new traits - to induce PMN inflammation and avoid adaptive immunity - to allow efficient sexual transmission. This model predicts that PMN inflammation produces the serious sequelae of gonorrhea and increases the probability that N. meningitidis might exit the oral cavity to produce systemic disease. In both cases, the pathology produced by these host-adapted species is an unintended by product of the inflammation but host damage does not provide any selective advantage for these organisms.


Asunto(s)
Neisseria/inmunología , Neisseria/patogenicidad , Neutrófilos/metabolismo , Especificidad del Huésped , Interacciones Huésped-Patógeno , Humanos , Neisseria/clasificación , Neisseria/fisiología , Neisseria gonorrhoeae/inmunología , Neisseria gonorrhoeae/patogenicidad , Neisseria meningitidis/inmunología , Neisseria meningitidis/patogenicidad , Simbiosis
8.
Antonie Van Leeuwenhoek ; 112(7): 1001-1010, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-30798492

RESUMEN

Two Gram-stain negative, catalase positive, coccus shaped bacteria, designated 10023T and 10010, were isolated from the rectal contents of a plateau pika (Ochotona curzoniae) in Qinghai-Tibet Plateau, China. Based on 16S rRNA gene sequence analysis, phylogenetic trees showed that these two isolates (10023T, 10010) group with members of the genus Neisseria. Additionally, these two isolates exhibited high 16S rRNA gene sequence similarity with Neisseria zalophi CSL 7565T (96.98%), Neisseria wadsworthii WC 05-9715T (96.92%) and Neisseria canis ATCC 14687T (96.79%). Further phylogenetic analysis based on the rplF gene showed that these two novel strains can be easily discriminated from phylogenetically closely related species. Optimal growth was found to occur on BHI agar with 5% defibrinated sheep blood at 37 °C and growth was also observed on nutrient agar, Columbia blood agar and chocolate agar plates; however, growth was not observed on MacConkey agar after 7 days. The major cellular fatty acids of these strains were identified as C16:0 and C16:1ω7c/C16:1ω6c. The complete genome size of the type strain 10023T is 2,496,444 bp, with DNA G+C content of 54.0 mol %. The average nucleotide identity values were 73.5-79.3% between isolate 10023T and reference Neisseria spp. Based on polyphasic analysis, these isolates (10023T and 10010) are considered to represent a novel species in the genus Neisseria, for which the name Neisseria chenwenguii sp. nov. is proposed. The type strain is 10023T (= DSM 103440T = CGMCC 1.15736T).


Asunto(s)
Lagomorpha/microbiología , Neisseria/aislamiento & purificación , Recto/microbiología , Animales , Técnicas de Tipificación Bacteriana , Composición de Base , ADN Bacteriano/genética , Ácidos Grasos/química , Ácidos Grasos/metabolismo , Neisseria/clasificación , Neisseria/genética , Neisseria/metabolismo , Filogenia , ARN Ribosómico 16S/genética , Tibet
9.
Microbiome ; 6(1): 218, 2018 12 06.
Artículo en Inglés | MEDLINE | ID: mdl-30522523

RESUMEN

BACKGROUND: The oral cavity comprises a rich and diverse microbiome, which plays important roles in health and disease. Previous studies have mostly focused on adult populations or in very young children, whereas the adolescent oral microbiome remains poorly studied. Here, we used a citizen science approach and 16S profiling to assess the oral microbiome of 1500 adolescents around Spain and its relationships with lifestyle, diet, hygiene, and socioeconomic and environmental parameters. RESULTS: Our results provide a detailed snapshot of the adolescent oral microbiome and how it varies with lifestyle and other factors. In addition to hygiene and dietary habits, we found that the composition of tap water was related to important changes in the abundance of several bacterial genera. This points to an important role of drinking water in shaping the oral microbiota, which has been so far poorly explored. Overall, the microbiome samples of our study can be clustered into two broad compositional patterns (stomatotypes), driven mostly by Neisseria and Prevotella, respectively. These patterns show striking similarities with those found in unrelated populations. CONCLUSIONS: We hypothesize that these stomatotypes represent two possible global optimal equilibria in the oral microbiome that reflect underlying constraints of the human oral niche. As such, they should be found across a variety of geographical regions, lifestyles, and ages.


Asunto(s)
Bacterias/clasificación , Agua Potable/microbiología , Metagenómica/métodos , Boca/microbiología , Adolescente , Adulto , Bacterias/genética , Bacterias/aislamiento & purificación , ADN Bacteriano/genética , ADN Ribosómico/genética , Conducta Alimentaria , Humanos , Higiene , Estilo de Vida , Neisseria/clasificación , Neisseria/genética , Neisseria/aislamiento & purificación , Filogenia , Prevotella/clasificación , Prevotella/genética , Prevotella/aislamiento & purificación , ARN Ribosómico 16S/genética , Maestros , Análisis de Secuencia de ADN , España
10.
Eur J Clin Microbiol Infect Dis ; 37(12): 2273-2277, 2018 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-30178231

RESUMEN

Through the past decade, MALDI-TOF MS has been recognized as a fast and robust tool for identification of most bacteria in clinical microbiology. However, the accuracy of this method to identify Neisseria species is still debated, and few data are available about commensal Neisseria species identification. In this study, we assessed two MALDI-TOF MS systems (Bruker Biotyper and Andromas) for the identification of 88, 18, and 29 isolates of Neisseria gonorrhoeae, Neisseria meningitidis, and commensal Neisseria species, respectively. All 88 isolates of N. gonorrhoeae were correctly identified using both systems, and most N. meningitidis and commensal Neisseria species were well identified: only 1/18 isolates of N. meningitidis was misidentified using Bruker Biotyper, and 1 isolate of Neisseria polysaccharea was misidentified as N. meningitidis using both systems. These results strengthen the possibility to use MALDI-TOF MS as a single method for Neisseria identification in routine, with excellent performance for N. gonorrhoeae identification. However, results should be interpreted prudently for N. meningitdis and commensal Neisseria species when isolated from genital and oropharyngeal samples where these both species can coexist.


Asunto(s)
Neisseria/clasificación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/instrumentación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Bancos de Muestras Biológicas , Humanos , Neisseria/aislamiento & purificación , Neisseria gonorrhoeae/aislamiento & purificación , Neisseria meningitidis/aislamiento & purificación , Simbiosis
11.
Microb Genom ; 4(9)2018 09.
Artículo en Inglés | MEDLINE | ID: mdl-30074474

RESUMEN

The genus Neisseria comprises a diverse group of commensal bacteria, which typically colonize the mucosal surfaces of humans and other animals. Neisseria meningitidis, the meningococcus, is notable for its potential to cause invasive meningococcal disease (IMD) in humans; however, IMD is comparatively rare, and meningococci normally colonize the nasopharynx asymptomatically. Possession of a polysaccharide capsule has been shown to be a prerequisite for disease in almost all IMD cases, and was previously considered unique to N. meningitidis, and potentially acquired by horizontal genetic transfer (HGT). Nevertheless, the capsule must also have some role in asymptomatic colonization and/or transmission, consistent with the existence of six non-disease-associated meningococcal capsule serogroups. In this study, full complements of putative capsule genes were identified in non-pathogenic Neisseria species, including Neisseria subflava and Neisseria elongata. These species contained genes for capsule transport and translocation homologous to those of N. meningitidis, as well as novel putative capsule synthesis genes. Phylogenetic analyses were consistent with the proposal that these genes were acquired by the meningococcus through HGT. In contrast with previous evolutionary models, however, the most parsimonious explanation of these data was that capsule transport genes had been lost in the common ancestor of the meningococcus, gonococcus, and their close relatives, and then reacquired by some meningococci. The most likely donor of the meningococcal transport genes was another Neisseria species.


Asunto(s)
Cápsulas Bacterianas/genética , Neisseria/genética , Genes Bacterianos , Neisseria/clasificación , Filogenia
12.
PLoS One ; 13(7): e0200728, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30001426

RESUMEN

ADHD is a psychiatric disorder which is characterized by hyperactivity, impulsivity and attention problems. Due to recent findings of microbial involvement in other psychiatric disorders like autism and depression, a role of the gut microbiota in ADHD pathogenesis is assumed but has not yet been investigated. In this study, the gut microbiota of 14 male ADHD patients (mean age: 11.9 yrs.) and 17 male controls (mean age: 13.1 yrs.) was examined via next generation sequencing of 16S rDNA and analyzed for diversity and biomarkers. We found that the microbial diversity (alpha diversity) was significantly decreased in ADHD patients compared to controls (pShannon = 0.036) and that the composition (beta diversity) differed significantly between patients and controls (pANOSIM = 0.033, pADONIS = 0.006, pbetadisper = 0.002). In detail, the bacterial family Prevotellacae was associated with controls, while patients with ADHD showed elevated levels of Bacteroidaceae, and both Neisseriaceae and Neisseria spec. were found as possible biomarkers for juvenile ADHD. Our results point to a possible link of certain microbiota with ADHD, with Neisseria spec. being a very promising ADHD-associated candidate. This finding provides the basis for a systematic, longitudinal assessment of the role of the gut microbiome in ADHD, yielding promising potential for both prevention and therapeutic intervention.


Asunto(s)
Trastorno por Déficit de Atención con Hiperactividad/microbiología , Biodiversidad , Microbioma Gastrointestinal , Neisseria , Adolescente , Trastorno por Déficit de Atención con Hiperactividad/genética , Niño , ADN Bacteriano/genética , ADN Ribosómico/genética , Humanos , Masculino , Neisseria/clasificación , Neisseria/genética , Neisseria/aislamiento & purificación , ARN Bacteriano/genética , ARN Ribosómico 16S/genética
13.
J Clin Lab Anal ; 32(1)2018 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-28374932

RESUMEN

BACKGROUND: We investigated the diversity of the primary sequences of the 16S rRNA genes among 46 commensal Neisseria strains and evaluated the use of this approach as a molecular typing tool in comparison with PFGE analysis. METHODS: Identification to the genus was done using conventional methods and API NH (bio-Mérieux® ). Identification to species level was based on 16S rRNA gene sequencing. PFGE analysis was done using SpeI. RESULTS: Fourteen, two, three and fourteen 16S rRNA sequence types were found among twenty Neisseria flavescens, two Neisseria sicca, five Neisseria macacae and nineteen Neisseria mucosa clinical isolates. Forty-three different PFGE patterns were found among the tested strains. CONCLUSION: We demonstrated a high diversity among 16S rRNA genes which was reflected by PFGE analysis.


Asunto(s)
Tipificación Molecular/métodos , Neisseria/genética , ARN Ribosómico 16S/genética , ADN Bacteriano/análisis , ADN Bacteriano/genética , Electroforesis en Gel de Campo Pulsado , Técnicas de Genotipaje , Humanos , Neisseria/clasificación , Infecciones por Neisseriaceae/microbiología , Reacción en Cadena de la Polimerasa , Análisis de Secuencia de ADN
14.
Cancer Res ; 77(23): 6777-6787, 2017 12 01.
Artículo en Inglés | MEDLINE | ID: mdl-29196415

RESUMEN

Bacteria may play a role in esophageal adenocarcinoma (EAC) and esophageal squamous cell carcinoma (ESCC), although evidence is limited to cross-sectional studies. In this study, we examined the relationship of oral microbiota with EAC and ESCC risk in a prospective study nested in two cohorts. Oral bacteria were assessed using 16S rRNA gene sequencing in prediagnostic mouthwash samples from n = 81/160 EAC and n = 25/50 ESCC cases/matched controls. Findings were largely consistent across both cohorts. Metagenome content was predicted using PiCRUST. We examined associations between centered log-ratio transformed taxon or functional pathway abundances and risk using conditional logistic regression adjusting for BMI, smoking, and alcohol. We found the periodontal pathogen Tannerella forsythia to be associated with higher risk of EAC. Furthermore, we found that depletion of the commensal genus Neisseria and the species Streptococcus pneumoniae was associated with lower EAC risk. Bacterial biosynthesis of carotenoids was also associated with protection against EAC. Finally, the abundance of the periodontal pathogen Porphyromonas gingivalis trended with higher risk of ESCC. Overall, our findings have potential implications for the early detection and prevention of EAC and ESCC. Cancer Res; 77(23); 6777-87. ©2017 AACR.


Asunto(s)
Adenocarcinoma/microbiología , Carcinoma de Células Escamosas/microbiología , Neoplasias Esofágicas/microbiología , Microbiota/genética , Boca/microbiología , Neisseria/aislamiento & purificación , Porphyromonas gingivalis/aislamiento & purificación , Streptococcus pneumoniae/aislamiento & purificación , Tannerella forsythia/aislamiento & purificación , Adenocarcinoma/epidemiología , Anciano , Carcinoma de Células Escamosas/epidemiología , Estudios de Casos y Controles , Neoplasias Esofágicas/epidemiología , Carcinoma de Células Escamosas de Esófago , Femenino , Humanos , Masculino , Persona de Mediana Edad , Neisseria/clasificación , Neisseria/genética , Porphyromonas gingivalis/clasificación , Porphyromonas gingivalis/genética , Estudios Prospectivos , ARN Ribosómico 16S/genética , Streptococcus pneumoniae/clasificación , Streptococcus pneumoniae/genética , Encuestas y Cuestionarios , Tannerella forsythia/clasificación , Tannerella forsythia/genética
15.
Rev Chilena Infectol ; 34(4): 389-392, 2017 Aug.
Artículo en Español | MEDLINE | ID: mdl-29165520

RESUMEN

Neisseria subflava belongs to Neisseriaceae family, is considered a comensal specie, however in certain host, mainly inmunosuppresed patientes and children, the literature has documented invasive infections. We present a case of a bacteriemia due to N. subflava in a newborn, treated with cefotaxime with good outcome. In newborns, the most common Neisseria bacteria to cause invasive infections are N. meningitidis, with highly fatal clinical course and N. gonorrhoeae which compromise the eye, oftalmia neonatorum, with uncommon invasive infections. It's very important the adequate microbiological diagnosis because the biochemical tests may be inconclusive. MALDITOF mass spectrometry technique is a useful tool.


Asunto(s)
Bacteriemia/microbiología , Neisseria/clasificación , Infecciones por Neisseriaceae/microbiología , Bacteriemia/diagnóstico , Humanos , Huésped Inmunocomprometido , Recién Nacido , Masculino , Infecciones por Neisseriaceae/diagnóstico
16.
Int J Syst Evol Microbiol ; 67(11): 4304-4310, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-28933320

RESUMEN

Three independent isolates of Gram-reaction-negative cocci collected from two New York State patients and a dog's mouth in California were subjected to a polyphasic analysis. The 16S rRNA gene sequence similarity among these isolates is 99.66 to 99.86 %. The closest species with a validly published name is Neisseria zoodegmatis (98.7 % 16S rRNA gene sequence similarity) with six additional species of the genus Neisseria with greater than 97 % similarity. Average nucleotide identity (ANI) and genome-to-genome distance calculator (GGDC 2.0) analysis on whole genome sequence data support the three novel isolates as being from a single species that is distinct from all other closely related species of the genus Neisseria. Phylogenetic analysis of 16S rRNA gene sequences and ribosomal multilocus sequence typing (rMLST) indicate the novel species belongs in the genus Neisseria. This assignment is further supported by the predominant cellular fatty acids composition of C16 : 0, summed feature 3 (C16 : 1ω7c/C15 : 0iso 2-OH), and C18 : 1ω7c, and phenotypic characters. The name Neisseria dumasiana sp. nov. is proposed, and the type strain is 93087T (=DSM 104677T=LMG 30012 T).


Asunto(s)
Perros/microbiología , Neisseria/clasificación , Filogenia , Esputo/microbiología , Animales , Técnicas de Tipificación Bacteriana , Composición de Base , California , ADN Bacteriano/genética , Ácidos Grasos/química , Humanos , Boca/microbiología , Neisseria/genética , Neisseria/aislamiento & purificación , New York , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN
17.
Rev. chil. infectol ; 34(4): 389-392, ago. 2017. graf
Artículo en Español | LILACS | ID: biblio-899730

RESUMEN

Resumen Neisseria subflava es una especie considerada comensal dentro de la familia Neisseriaceae; sin embargo, en algunos hospederos inmunocomprometidos y en niños se ha documentado como agente causal de infecciones invasoras. Se presenta el caso clínico de un recién nacido con bacteriemia por N. subflava con buena respuesta a terapia con cefotaxima. Las bacterias del género Neisseria más frecuentes de causar infecciones en recién nacidos son N. meningitidis, de alta mortalidad y N. gonorrhoeae, que se manifiesta principalmente con oftalmia neonatorum. Se destaca la importancia de realizar un diagnóstico microbiológico adecuado dado que las pruebas biquímicas pueden ser no concluyentes. La técnica de espectrometría de masas MALDITOF resulta una herramienta de utilidad.


Neisseria subflava belongs to Neisseriaceae family, is considered a comensal specie, however in certain host, mainly inmunosuppresed patientes and children, the literature has documented invasive infections. We present a case of a bacteriemia due to N. subflava in a newborn, treated with cefotaxime with good outcome. In newborns, the most common Neisseria bacteria to cause invasive infections are N. meningitidis, with highly fatal clinical course and N. gonorrhoeae which compromise the eye, oftalmia neonatorum, with uncommon invasive infections. It's very important the adequate microbiological diagnosis because the biochemical tests may be inconclusive. MALDITOF mass spectrometry technique is a useful tool.


Asunto(s)
Humanos , Masculino , Recién Nacido , Infecciones por Neisseriaceae/microbiología , Bacteriemia/microbiología , Neisseria/clasificación , Infecciones por Neisseriaceae/diagnóstico , Huésped Inmunocomprometido , Bacteriemia/diagnóstico
18.
Int J Syst Evol Microbiol ; 67(5): 1115-1119, 2017 May.
Artículo en Inglés | MEDLINE | ID: mdl-28056218

RESUMEN

During the summers of 2013 and 2014, isolates of a novel Gram-stain-negative coccus in the genus Neisseriawere obtained from the contents of nonviable greater white-fronted goose (Anseralbifrons) eggs on the Arctic Coastal Plain of Alaska. We used a polyphasic approach to determine whether these isolates represent a novel species. 16S rRNA gene sequences, 23S rRNA gene sequences, and chaperonin 60 gene sequences suggested that these Alaskan isolates are members of a distinct species that is most closely related to Neisseria canis, Neisseriaanimaloris and Neisseriashayeganii. Analysis of the rplF gene additionally showed that the isolates are unique and most closely related to Neisseriaweaveri. Average nucleotide identity of the whole genome sequence of the type strain was between 71.5 and 74.6 % compared to close relatives, further supporting designation as a novel species. Fatty acid methyl ester analysis showed a predominance of C14 : 0, C16 : 0 and C16 : 1ω7c fatty acids. Finally, biochemical characteristics distinguished the isolates from other species of the genus Neisseria. On the basis of these combined data, the isolates are proposed to represent a novel species of the genus Neisseria, with the name Neisseria arctica sp. nov. The type strain is KH1503T (=ATCC TSD-57T=DSM 103136T).


Asunto(s)
Gansos/microbiología , Neisseria/clasificación , Óvulo/microbiología , Filogenia , Alaska , Animales , Regiones Árticas , Técnicas de Tipificación Bacteriana , Composición de Base , Chaperonina 60/genética , ADN Bacteriano/genética , Ácidos Grasos/química , Neisseria/genética , Neisseria/aislamiento & purificación , ARN Ribosómico 16S/genética , ARN Ribosómico 23S/genética , Análisis de Secuencia de ADN
19.
Jpn J Infect Dis ; 70(2): 203-206, 2017 Mar 24.
Artículo en Inglés | MEDLINE | ID: mdl-27357994

RESUMEN

Multidrug-resistant Acinetobacter baumannii (MDRAB) colonization increases the risk of bacterial spread in the hospital setting. The impact of clinical factors, including antibiotic use, on prolongation of MDRAB colonization has not been investigated. Patients with respiratory tract MDRAB detected using culture were enrolled in this study. Long-term colonizers and short-term colonizers were defined as patients whose colonization periods were >30 days or ≤30 days, respectively. Clinical data were abstracted from medical records. MDRAB was isolated in 34 patients. There were 13 long-term colonizers and 9 short-term colonizers. Twelve patients were lost to follow-up and excluded from the study. There were no significant differences in average leukocyte counts, numbers of antibiotic classes administered, duration of antibiotic use in the 30 days following colonization, or rates of central catheterization or mechanical ventilation between the 2 groups. Long-term colonizers carried Neisseria species (spp.) more frequently in the 30 days following colonization than short-term colonizers (7/13 vs 1/9, p = 0.01); however, this was not the case prior to colonization with MDRAB (5/13 vs 1/9, p = 0.33). The 90-day MDRAB colonization rates for Neisseria-negative patients and Neisseria-positive patients were 10.0% and 83.3%, respectively (P < 0.01). Prolonged MDRAB colonization in the respiratory tract was associated with Neisseria spp. co-colonization.


Asunto(s)
Infecciones por Acinetobacter/complicaciones , Acinetobacter baumannii/aislamiento & purificación , Coinfección/complicaciones , Farmacorresistencia Bacteriana Múltiple , Neisseria/aislamiento & purificación , Infecciones por Neisseriaceae/complicaciones , Infecciones del Sistema Respiratorio/microbiología , Infecciones por Acinetobacter/epidemiología , Infecciones por Acinetobacter/microbiología , Acinetobacter baumannii/efectos de los fármacos , Anciano , Anciano de 80 o más Años , Portador Sano/epidemiología , Portador Sano/microbiología , Coinfección/epidemiología , Coinfección/microbiología , Femenino , Humanos , Masculino , Persona de Mediana Edad , Neisseria/clasificación , Infecciones por Neisseriaceae/epidemiología , Infecciones por Neisseriaceae/microbiología , Prevalencia , Infecciones del Sistema Respiratorio/epidemiología , Factores de Riesgo
20.
J Bacteriol ; 198(21): 3029-3040, 2016 11 01.
Artículo en Inglés | MEDLINE | ID: mdl-27551020

RESUMEN

Neisseria gonorrhoeae (gonococci) and Neisseria meningitidis (meningococci) are human pathogens that cause gonorrhea and meningococcal meningitis, respectively. Both N. gonorrhoeae and N. meningitidis release a number of small peptidoglycan (PG) fragments, including proinflammatory PG monomers, although N. meningitidis releases fewer PG monomers. The PG fragments released by N. gonorrhoeae and N. meningitidis are generated in the periplasm during cell wall remodeling, and a majority of these fragments are transported into the cytoplasm by an inner membrane permease, AmpG; however, a portion of the PG fragments are released into the extracellular environment through unknown mechanisms. We previously reported that the expression of meningococcal ampG in N. gonorrhoeae reduced PG monomer release by gonococci. This finding suggested that the efficiency of AmpG-mediated PG fragment recycling regulates the amount of PG fragments released into the extracellular milieu. We determined that three AmpG residues near the C-terminal end of the protein modulate AmpG's efficiency. We also investigated the association between PG fragment recycling and release in two species of human-associated nonpathogenic Neisseria: N. sicca and N. mucosa Both N. sicca and N. mucosa release lower levels of PG fragments and are more efficient at recycling PG fragments than N. gonorrhoeae Our results suggest that N. gonorrhoeae has evolved to increase the amounts of toxic PG fragments released by reducing its PG recycling efficiency. IMPORTANCE: Neisseria gonorrhoeae and Neisseria meningitidis are human pathogens that cause highly inflammatory diseases, although N. meningitidis is also frequently found as a normal member of the nasopharyngeal microbiota. Nonpathogenic Neisseria, such as N. sicca and N. mucosa, also colonize the nasopharynx without causing disease. Although all four species release peptidoglycan fragments, N. gonorrhoeae is the least efficient at recycling and releases the largest amount of proinflammatory peptidoglycan monomers, partly due to differences in the recycling permease AmpG. Studying the interplay between bacterial physiology (peptidoglycan metabolism) and pathogenesis (release of toxic monomers) leads to an increased understanding of how different bacterial species maintain asymptomatic colonization or cause disease and may contribute to efforts to mitigate disease.


Asunto(s)
Proteínas Bacterianas/metabolismo , Proteínas de Transporte de Membrana/metabolismo , Neisseria gonorrhoeae/enzimología , Neisseria meningitidis/enzimología , Infecciones por Neisseriaceae/microbiología , Peptidoglicano/metabolismo , Secuencias de Aminoácidos , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Pared Celular/química , Pared Celular/genética , Pared Celular/metabolismo , Proteínas de Transporte de Membrana/química , Proteínas de Transporte de Membrana/genética , Neisseria/clasificación , Neisseria/enzimología , Neisseria/crecimiento & desarrollo , Neisseria/metabolismo , Neisseria gonorrhoeae/química , Neisseria gonorrhoeae/citología , Neisseria gonorrhoeae/crecimiento & desarrollo , Neisseria meningitidis/química , Neisseria meningitidis/citología , Neisseria meningitidis/crecimiento & desarrollo , Peptidoglicano/química , Peptidoglicano/toxicidad
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